Protein ZmIAA28
ZmIAA28 is a protein in the Aux/IAA family.
Information
Coreg Name: ZmIAA28
Species: Maize
Coreg Family: Aux/IAA
Gene Name(Synonym): IAA38
Uniprot ID: B4G201
Subgenome: 2

Protein ZmIAA28

ZmIAA28 is a protein in the Aux/IAA family.

Overview of domains present in v5 transcripts
PF02309
Zm00001eb350370_T005
Zm00001eb350370_T001
Zm00001eb350370_T002
Zm00001eb350370_T003
Zm00001eb350370_T004
Zm00001eb350370_T006

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d010411DAPseq no logo sequence fimo position
Zm00001d010411DAPseq no logo sequence fimo position
Zm00001d010411ChIPseq no logo sequence fimo position
Zm00001d010411PChIPseq no logo sequence fimo position

Interactions where ZmIAA28 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmIAA28 is the target  
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There are 39 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb350370_T005 from maize genome v5

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWDCHIVFRSNCRMFAGSCRRLRIMKGSD
AIGLGMFVLLLCLVYRRANHVVLVVWWKRWDRSTFYCRLYMIQFLLRSSCPMVLVPAWLHHWW

MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWDCHIVFRSNCRMFAGSCRRLRIMKGSD
AIGLGMFVLLLCLVYRRANHVVLVVWWKRWDRSTFYCRLYMIQFLLRSSCPMVLVPAWLHHWW

MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWDCHIVFRSNCRMFAGSCRRLRIMKGSD
AIGLGMFVLLLCLVYRRANHVVLVVWWKRWDRSTFYCRLYMIQFLLRSSCPMVLVPAWLHHWW

MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWDCHIVFRSNCRMFAGSCRRLRIMKGSD
AIGLGMFVLLLCLVYRRANHVVLVVWWKRWDRSTFYCRLYMIQFLLRSSCPMVLVPAWLHHWW

MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWDCHIVFRSNCRMFAGSCRRLRIMKGSD
AIGLGMFVLLLCLVYRRANHVVLVVWWKRWDRSTFYCRLYMIQFLLRSSCPMVLVPAWLHHWW

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF02309
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Nucleotide Sequence
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ACCTGATCACCCTTCAAACAAATCA...

GRMZM2G035465_T01 from maize genome v3

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWE

Nucleotide Sequence
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AGGGAAGCTTCACCTGATCACCCTT...

GRMZM2G035465_T02 from maize genome v3

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWDSKGSR

Nucleotide Sequence
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AGGGAAGCTTCACCTGATCACCCTT...

GRMZM2G035465_T03 from maize genome v3

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWDCHIVFRSNCRMFAGSCRRLRIMKGSD
AIGLAPRAADKSKNRN

Nucleotide Sequence
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CACCTGATCACCCTTCAAACAAATC...

GRMZM2G035465_T04 from maize genome v3


Related TFome: pUT5585

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFAGSCRRLRIMKGSDAIGLAPRAAD
KSKNRN

Nucleotide Sequence
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CACCTGATCACCCTTCAAACAAATC...

GRMZM2G035465_T05 from maize genome v3

Amino Acid Sequence
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MTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKTYKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYE
DKDGDWMLVGDVPWE

Nucleotide Sequence
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CAAATTCTCTACTTTCGAAAATGCG...

GRMZM2G035465_T06 from maize genome v3

Amino Acid Sequence
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LVRRIPCLVSACETEQTKLIFCREAI

Nucleotide Sequence
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GATCTGTACGAAAACCGAAAAAGTC...

Zm00001d010411_T001 from maize genome v4

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFAGSCRRLRIMKGSDAIGLGMFVLL
LCLVYRRANHVVLLQGQPISPRTATRTVASYPYTVRYEGGDAVTCRDLYENRKSLLTAMTCEKNSGLWSALEWLGTSSMD
KTRYSINCC

Nucleotide Sequence
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GATCACCCTTCAAACAAATCACTCT...

Zm00001d010411_T002 from maize genome v4

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDLQGQPISPRTATRTVASYPYTVRYEGGDAV
TCRDLYENRKSLLTAMTCEKNSGLWSALEWLGTSSMDKTRYSINCC

Nucleotide Sequence
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GATCACCCTTCAAACAAATCACTCT...

Zm00001d010411_T003 from maize genome v4

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFAGSCRRLRIMKGSDAIGLAPRAAD
KSKNRN

Nucleotide Sequence
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GATCACCCTTCAAACAAATCACTCT...

Zm00001d010411_T004 from maize genome v4

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWDVFRSNCRMFAGSCRRLRIMKGSDAIG
LAPRAADKSKNRN

Nucleotide Sequence
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GCACTCTTTCCCCTTCCCTTCCCTT...

Zm00001d010411_T005 from maize genome v4

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWE

Nucleotide Sequence
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GGCTCCGACTCGCACTCTTTCCCCT...

Zm00001eb350370_T001 from maize genome v5

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFAGSCRRLRIMKGSDAIGLAPRAAD
KSKNRN

Nucleotide Sequence
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GCCAAGTGTAACCAACCCAGCTCGA...

Zm00001eb350370_T002 from maize genome v5

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFAGSCRRLRIMKGSDAIGLGMFVLL
LCLVYRRANHVVLVVWWKRWDRSTFYCRLYMIQFLLRSSCPMVLVPAWLHHWW

Nucleotide Sequence
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AGGGAAGCTTCACCTGATCACCCTT...

Zm00001eb350370_T003 from maize genome v5

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWE

Nucleotide Sequence
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AGGGAAGCTTCACCTGATCACCCTT...

Zm00001eb350370_T004 from maize genome v5

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWDSKGSR

Nucleotide Sequence
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AGGGAAGCTTCACCTGATCACCCTT...

Zm00001eb350370_T006 from maize genome v5

Amino Acid Sequence
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MSPPLELDYIGLSPPAAAAAAENDELKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPPPSPVATAGK
GKKVAEEEYDEKKVAATPQPAAKAQVVGWPPVCNYRKNTMTTTQLEGSKEDGDAKQGQGFLYVKVSMDGAPYLRKIDLKT
YKNYKDLSTALEKMFSGFSTGKDGSSEYRKDGEYVLTYEDKDGDWMLVGDVPWDCHIVFRSNCRMFAGSCRRLRIMKGSD
AIGLVRSIVGCT

Nucleotide Sequence
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CCCACTCTCACCCCTTCCGCCTACC...


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